Genomics of Gene Expression

Welcome to the ConesaLab website!

Latest papers and news
Spring of 2026

What a wonderful time of the year spring is! The...

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Squids in space
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February at ConesaLab: Short month, big science!
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New Year, Same Lab ๐ŸŽ‰
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It's that time of the year ๐ŸŽ„
Research Lines

Long-reads transcriptomics

We are developing methods and software for the analysis of alternative isoform expression and its effect on the phenotype.

Integration of Multi-Omics data

We have created a wide array of tools for the analysis of multi-omics data including experimental design, removal of batch effects, simulation of datasets, integration, and visualization.

Single-cell and spatial transcriptomics

We are developing cutting edge algorithms to analyze single cell data, taking special focus on the use of long read data. This goes in combination with spatial-transcriptomics, shaping the future of the field.

Resource and community building

We want to provide scientists easy and accessible tools for their research. Thus, we have created tutorials and guidelines to work with our tools.

Our Tools

Our lab develops statistical methods and user-friendly software tools to analyze these multi-omics data. Our most current interest is the application of long reads sequencing technologies for transcriptome analysis and the integration of multi-omics data to model chromatin-metabolome regulation.

Latest News
Spring of 2026
What a wonderful time of the year spring is! The days get longer, the sun gets brighter, and science...
Squids in space
Who would have thought that a squid would go to space before you? Yes, you read right, a squidโ€ฆ For those...
It's that time of the year ๐ŸŽ„
Itโ€™s beginning to look a lot like Christmasโ€ฆ Which means finally getting some holidays and turning off...
The new ISCB Vice-President has been elected
Years of hard work always yield their reward. As the saying goes, “you reap what you sow”....